PDBsum entry 2phd Go to PDB code:  Tunnel analysis for: 2phd calculated with MOLE 2.0 PDB id 2phd Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.31 1.43 23.1 -0.01 -0.20 10.0 89 2 1 1 3 0 1 0   2 1.96 3.39 20.6 -2.18 -0.21 33.7 79 5 2 2 3 1 1 0  FE 370 A ACT 371 A 3 1.56 1.66 21.9 -2.15 -0.26 33.5 79 5 2 2 3 1 1 0  FE 370 A ACT 371 A 4 1.15 1.15 23.4 0.09 -0.16 7.5 89 2 1 1 3 0 1 0   5 1.17 1.17 28.4 -0.21 -0.19 10.7 90 3 2 1 4 0 1 0   6 1.52 2.55 20.1 0.19 0.24 13.7 67 4 2 0 1 3 0 1   7 1.16 1.47 18.9 -0.23 0.26 12.2 76 2 1 2 5 2 1 0   8 1.16 2.61 18.6 1.90 0.52 5.7 70 1 1 0 5 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.