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PDBsum entry 2pfv

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Endocytosis/exocytosis PDB id
2pfv
Contents
Protein chain
549 a.a.
Waters ×111

References listed in PDB file
Key reference
Title The crystal structure of mouse exo70 reveals unique features of the mammalian exocyst.
Authors B.A.Moore, H.H.Robinson, Z.Xu.
Ref. J Mol Biol, 2007, 371, 410-421. [DOI no: 10.1016/j.jmb.2007.05.018]
PubMed id 17583731
Abstract
The exocyst is a eukaryotic tethering complex necessary for the fusion of exocytic vesicles with the plasma membrane. Its function in vivo is tightly regulated by interactions with multiple small GTPases. Exo70, one of the eight subunits of the exocyst, is important for the localization of the exocyst to the plasma membrane. It interacts with TC10 and Rho3 GTPases in mammals and yeast, respectively, and has been shown recently to bind to the actin-polymerization complex Arp2/3. Here, we present the crystal structure of Mus musculus Exo70 at 2.25 A resolution. Exo70 is composed of alpha-helices in a series of right-handed helix-turn-helix motifs organized into a long rod of length 170 A and width 35 A. Although the alpha-helical organization of this molecule is similar to that in Saccharomyces cerevisiae Exo70, major structural differences are observed on the surface of the molecule, at the domain boundaries, and in various loop structures. In particular, the C-terminal domain of M. musculus Exo70 adopts a new orientation relative to the N-terminal half not seen in S. cerevisiae Exo70 structures. Given the low level of sequence conservation within Exo70, this structure provides new insights into our understanding of many species-specific functions of the exocyst.
Figure 1.
Figure 1. A stereo cartoon diagram of MmExo70 is shown. Residues are shown in color: N domain, red; M domain, yellow; and C domain, blue. The α-helices are drawn as coils and labeled from H1 to H19; turns and loops, solid tubes; unobserved residues, broken lines (no β strands are observed in the structure).
Figure 2.
Figure 2. Structural alignment of Exo70 in M. musculus, H. sapiens, D. melanogaster, S. pombe, and S. cerevisiae. Invariant residues are shaded purple. Similar but not identical residues are shaded pink. Secondary structural elements are indicated above the sequence block for MmExo70 and below for ScExo70: α-helices, rectangles; other elements, continuous lines; structurally unobserved residues, broken lines. For MmExo70: N domain, red; M domain, yellow; and C domain, blue (same as Figure 1). For ScExo70: N domain, brown; M domain, green; and C domain, cyan. For clarity, sequences lacking homology or unobserved in the structures have been replaced with bracketed numbers indicating the number of residues omitted.
The above figures are reprinted by permission from Elsevier: J Mol Biol (2007, 371, 410-421) copyright 2007.
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