PDBsum entry 2pf6 Go to PDB code:  Tunnel analysis for: 2pf6 calculated with MOLE 2.0 PDB id 2pf6 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.39 1.39 16.9 1.04 -0.01 4.3 79 2 0 0 5 0 2 0   2 1.39 1.39 20.5 0.47 -0.13 6.3 75 2 1 0 4 0 3 0   3 1.29 1.30 23.1 0.53 0.16 3.8 65 0 1 0 5 1 3 1   4 1.39 1.39 28.5 0.41 -0.08 11.7 81 4 2 0 5 0 1 0   5 1.40 1.40 28.6 -0.12 0.06 10.1 82 4 1 2 7 1 2 0   6 1.28 1.28 29.9 0.34 0.13 9.1 73 2 2 0 6 1 1 1   7 1.17 1.32 15.2 0.02 -0.23 3.1 70 1 0 1 2 2 1 0   8 1.15 1.46 19.6 -0.18 -0.16 6.3 62 1 1 1 2 2 1 2   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.