PDBsum entry 2p5e Go to PDB code:  Tunnel analysis for: 2p5e calculated with MOLE 2.0 PDB id 2p5e Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.61 1.95 16.7 -0.34 -0.19 8.1 76 3 1 3 1 2 1 0   2 1.57 1.76 18.1 -2.05 -0.41 27.1 79 3 2 1 1 1 1 0   3 1.10 2.03 16.2 -1.11 -0.40 22.0 78 2 2 2 2 0 0 0  GOL 905 E Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.