spacer
spacer

PDBsum entry 2ozo

Go to PDB code: 
Top Page protein ligands metals pores links
Pore analysis for: 2ozo calculated with MOLE 2.0 PDB id
2ozo
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
10 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.70 1.90 27.1 -1.69 -0.40 20.4 78 4 2 1 2 2 3 0  
2 1.10 1.64 32.7 1.08 0.09 4.5 82 2 1 1 9 1 0 0  ANP 615 A
3 1.13 1.49 34.0 1.05 0.27 6.9 77 3 2 1 10 2 0 0  
4 1.58 1.58 35.7 -1.28 -0.38 16.0 79 3 2 1 3 2 3 0  
5 1.92 1.98 37.2 -1.60 -0.45 22.1 80 4 3 2 4 2 1 0  
6 1.26 1.47 42.2 -1.30 -0.42 14.3 77 2 3 3 3 3 3 0  
7 1.27 1.46 43.1 -0.68 -0.33 12.1 80 4 3 3 6 3 0 0  
8 1.30 1.50 49.5 -1.06 -0.40 18.4 81 5 5 4 7 2 0 0  
9 1.28 1.48 50.8 -1.03 -0.43 11.6 77 2 3 3 4 3 3 0  
10 1.34 1.46 72.3 0.14 0.03 8.0 74 4 1 3 10 2 2 1  ANP 615 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer