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PDBsum entry 2oyn

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protein ligands metals links
Structural genomics, unknown function PDB id
2oyn

 

 

 

 

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Contents
Protein chain
137 a.a. *
Ligands
CDP
Metals
_NA
Waters ×106
* Residue conservation analysis
PDB id:
2oyn
Name: Structural genomics, unknown function
Title: Crystal structure of cdp-bound protein mj0056 from methanococcus jannaschii, pfam duf120
Structure: Hypothetical protein mj0056. Chain: a. Engineered: yes
Source: Methanocaldococcus jannaschii dsm 2661. Organism_taxid: 243232. Strain: dsm 2661, jal-1, jcm 10045, nbrc 100440. Atcc: 43067. Gene: mj0056. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Resolution:
1.85Å     R-factor:   0.199     R-free:   0.239
Authors: J.B.Bonanno,M.Dickey,K.T.Bain,C.Lau,R.Romero,D.Smith,S.Wasserman, J.M.Sauder,S.K.Burley,S.C.Almo,New York Sgx Research Center For Structural Genomics (Nysgxrc)
Key ref: J.B.Bonanno et al. Crystal structure of hypothetical protein from methanococcus jannaschii bound to cdp. To be published, .
Date:
22-Feb-07     Release date:   06-Mar-07    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
Q60365  (RIFK_METJA) -  Riboflavin kinase from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Seq:
Struc:
132 a.a.
137 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.7.1.161  - CTP-dependent riboflavin kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: riboflavin + CTP = CDP + FMN + H+
riboflavin
+ CTP
=
CDP
Bound ligand (Het Group name = CDP)
corresponds exactly
+ FMN
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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