spacer
spacer

PDBsum entry 2owr

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 2owr calculated with MOLE 2.0 PDB id
2owr
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
23 pores, coloured by radius 24 pores, coloured by radius 24 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.77 3.52 27.0 -2.22 -0.38 25.3 83 6 1 2 2 2 1 0  
2 3.95 4.09 30.1 -2.88 -0.69 29.1 77 8 4 3 0 1 2 0  
3 2.85 2.89 30.5 -2.33 -0.13 24.7 82 7 2 2 2 2 0 0  
4 2.13 3.10 31.0 -2.13 -0.55 17.2 90 1 2 6 0 2 0 0  
5 3.23 3.26 32.5 -2.23 -0.27 21.6 84 4 3 3 1 2 0 0  
6 2.87 2.93 33.1 -1.77 -0.54 19.2 85 5 3 5 3 1 0 0  
7 2.89 3.88 34.6 -1.70 -0.23 15.1 85 4 1 4 2 2 0 0  
8 3.04 4.02 35.3 -2.98 -0.53 31.5 80 8 4 5 0 2 1 0  
9 2.80 3.00 36.3 -1.97 -0.57 22.5 82 7 4 3 2 0 1 0  
10 2.79 3.52 39.6 -2.12 -0.32 22.6 82 8 1 4 3 2 1 0  
11 1.47 1.64 39.7 -1.04 -0.27 13.3 85 4 2 2 4 3 0 0  
12 2.88 3.07 42.5 -2.51 -0.56 28.2 79 8 5 5 2 1 1 0  
13 1.28 1.28 43.8 -1.39 -0.44 18.7 87 3 4 3 3 1 1 0  
14 2.51 5.24 47.4 -2.64 -0.55 30.9 74 8 5 3 2 1 1 0  
15 2.18 2.23 51.7 -1.99 -0.53 20.9 84 6 4 5 2 2 1 0  
16 3.23 3.26 53.8 -2.23 -0.52 21.0 77 9 6 6 1 3 2 0  
17 1.46 1.64 54.3 -1.78 -0.39 20.8 82 9 3 3 4 2 2 0  
18 1.66 1.67 68.1 -1.02 -0.43 13.0 89 6 2 8 6 3 1 0  
19 1.64 1.68 70.8 -0.96 -0.39 11.1 87 5 3 8 6 4 1 0  
20 2.22 2.37 74.4 -2.30 -0.43 28.4 80 11 6 7 5 2 1 0  
21 1.64 1.80 77.4 -2.61 -0.48 29.8 82 13 7 6 4 0 1 0  
22 1.24 2.65 113.1 -1.91 -0.58 25.4 86 8 4 5 3 1 2 0  
23 1.41 2.87 146.9 -2.19 -0.40 29.7 83 15 7 5 8 3 1 0  
24 1.32 1.32 186.0 -1.66 -0.46 15.4 82 15 6 9 4 7 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer