 |
PDBsum entry 2oui
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 2oui calculated with MOLE 2.0
|
PDB id
|
|
|
|
2oui
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
4 pores,
coloured by radius |
 |
5 pores,
coloured by radius
|
5 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.18 |
3.47 |
35.0 |
-0.96 |
-0.33 |
27.4 |
79 |
 |
2 |
9 |
2 |
4 |
0 |
1 |
0 |
 |
EDO 2004 B
|
 |
 |
2 |
 |
1.27 |
2.65 |
70.6 |
-2.56 |
-0.42 |
31.2 |
78 |
19 |
9 |
2 |
4 |
2 |
3 |
0 |
EDO 2005 B EDO 2002 C PGE 5002 C EDO 2009 D
|
 |
3 |
 |
1.33 |
2.58 |
75.1 |
-2.54 |
-0.38 |
31.0 |
77 |
18 |
7 |
4 |
5 |
2 |
3 |
0 |
EDO 2005 B PGE 5002 C EDO 2009 D
|
 |
4 |
 |
1.42 |
2.78 |
84.0 |
-2.80 |
-0.49 |
33.1 |
80 |
21 |
12 |
4 |
4 |
2 |
3 |
0 |
EDO 2006 B PGE 5004 B EDO 2002 C PGE 5002 C
|
 |
5 |
 |
1.38 |
2.80 |
86.5 |
-2.62 |
-0.45 |
31.8 |
77 |
20 |
10 |
2 |
5 |
2 |
3 |
0 |
EDO 2006 B PGE 5004 B PGE 5002 C
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |