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PDBsum entry 2or1

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Top Page protein dna_rna Protein-protein interface(s) tunnels links
Tunnel analysis for: 2or1 calculated with MOLE 2.0 PDB id
2or1
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.40 1.87 21.8 0.45 -0.07 5.2 82 1 2 2 4 0 2 0  
2 1.08 1.55 23.6 0.15 -0.09 7.5 74 1 2 1 5 0 2 0  
3 1.21 1.82 23.9 0.15 -0.16 5.9 82 1 2 2 5 0 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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