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PDBsum entry 2oov

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Pore analysis for: 2oov calculated with MOLE 2.0 PDB id
2oov
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.44 2.45 59.2 -1.01 -0.07 19.1 77 8 4 3 6 5 0 1  TPQ 405 B SME 634 B
2 1.73 1.88 62.6 -1.10 -0.33 18.5 86 12 4 4 4 2 0 0  
3 1.28 1.28 64.0 -1.45 -0.41 23.2 85 11 9 3 5 1 1 0  
4 1.28 1.28 64.3 -1.70 -0.43 25.6 85 11 9 3 5 1 1 0  
5 1.15 1.25 70.8 -1.77 -0.43 26.6 84 12 10 3 6 2 1 0  
6 1.44 1.68 74.9 -1.63 -0.56 23.8 84 5 7 2 6 0 2 0  
7 2.86 3.49 86.7 -1.86 -0.41 27.0 80 9 7 1 7 2 2 0  
8 1.75 3.16 88.4 -1.65 -0.45 24.0 87 12 11 7 5 1 2 0  
9 1.42 2.66 96.7 -0.65 -0.15 15.0 82 11 5 5 10 5 0 1  TPQ 405 B SME 634 B
10 1.45 1.66 115.7 -1.46 -0.37 23.1 83 10 8 3 11 2 2 0  
11 1.27 1.24 131.0 -2.07 -0.43 25.9 84 18 13 7 7 4 3 0  
12 1.27 1.24 131.4 -1.96 -0.41 24.9 84 18 13 7 7 4 3 0  
13 1.23 1.37 133.1 -2.03 -0.39 24.5 77 8 6 6 3 5 2 0  GOL 6026 B
14 1.17 1.34 142.8 -1.34 -0.40 17.0 82 13 7 8 8 5 3 0  
15 1.15 1.37 144.9 -1.54 -0.44 19.8 82 12 12 7 9 4 4 0  
16 1.28 1.45 146.2 -1.19 -0.41 13.7 84 14 7 11 8 5 5 0  
17 1.24 1.24 144.3 -0.52 -0.21 13.8 80 10 7 6 12 2 5 0  GOL 6001 F
18 1.19 1.53 151.3 -1.17 -0.42 14.1 84 14 7 11 8 4 6 0  
19 1.23 1.23 184.9 -1.36 -0.45 17.0 85 16 12 10 11 4 6 0  
20 1.19 1.45 190.0 -1.62 -0.47 20.5 85 17 18 10 12 3 7 0  
21 1.45 2.33 203.5 -1.41 -0.27 22.8 78 17 13 6 14 9 2 1  TPQ 405 A SME 634 A
22 1.28 1.52 229.7 -1.70 -0.46 22.9 76 20 15 12 14 6 8 0  GOL 6017 A
23 1.19 1.32 230.2 -1.36 -0.37 20.2 81 21 14 10 16 7 4 1  GOL 6022 E
24 1.46 1.45 233.0 -1.36 -0.36 21.8 79 13 9 5 15 2 7 1  
25 1.30 1.30 255.1 -1.44 -0.42 20.9 81 17 12 8 16 1 8 1  GOL 6028 D
26 1.20 1.42 255.9 -1.53 -0.43 20.8 78 22 14 13 13 6 10 0  
27 1.30 1.40 277.7 -1.29 -0.38 20.7 78 20 14 8 20 2 13 0  GOL 6028 D
28 1.26 1.95 303.4 -1.60 -0.46 22.1 81 27 18 14 18 6 8 1  GOL 6022 E
29 1.19 1.39 333.0 -1.68 -0.47 22.7 82 25 22 13 21 6 7 1  GOL 6022 E
30 1.25 1.67 384.2 -1.76 -0.43 24.4 83 26 25 14 19 6 4 1  TPQ 405 A SME 634 A GOL 6018 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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