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PDBsum entry 2ohh

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Pore analysis for: 2ohh calculated with MOLE 2.0 PDB id
2ohh
Pores calculated on whole structure Pores calculated excluding ligands

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28 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.85 2.48 34.2 -1.08 -0.03 14.9 79 5 3 3 3 3 3 0  FMN 701 A
2 1.90 3.48 35.5 -1.47 -0.10 23.6 76 5 6 3 4 2 2 1  
3 1.26 1.29 38.2 0.25 -0.14 14.4 78 1 3 0 8 1 0 0  
4 1.36 1.36 40.4 -1.25 -0.47 20.4 79 2 5 2 5 2 4 0  
5 1.81 2.73 45.1 -1.13 -0.01 16.8 76 7 3 3 5 4 3 0  FMN 2701 D
6 1.37 4.52 48.0 0.62 0.56 12.2 72 4 3 0 10 6 1 0  FMN 2701 D
7 1.30 4.44 54.3 0.48 0.36 11.4 75 3 3 1 13 5 1 0  FMN 701 A
8 1.37 4.50 65.0 -0.42 0.21 17.7 78 9 4 3 9 7 2 0  FMN 2701 D
9 2.28 3.50 69.8 -1.85 -0.51 20.8 78 8 8 5 5 4 2 1  
10 1.84 3.46 70.5 -1.73 -0.44 19.2 79 8 6 4 3 4 2 0  
11 2.28 3.49 73.0 -1.98 -0.41 22.2 77 9 8 5 6 4 3 1  
12 1.82 3.45 73.6 -1.96 -0.38 20.9 77 10 6 4 4 4 3 0  
13 2.28 3.49 76.1 -1.76 -0.46 21.1 78 10 8 5 5 4 2 1  
14 1.78 3.46 76.7 -1.76 -0.43 20.4 79 10 6 4 3 4 2 0  
15 1.31 4.80 79.5 -0.48 0.21 18.1 77 9 4 3 13 7 2 0  FMN 701 A
16 1.32 2.17 80.1 0.30 0.37 14.0 77 8 4 2 15 7 2 0  FMN 1701 B
17 2.64 4.43 79.7 -1.93 -0.37 25.0 74 13 8 2 3 6 3 0  
18 1.77 3.53 81.7 -1.75 -0.62 16.5 80 6 11 6 4 2 2 1  
19 1.33 1.33 83.5 -1.75 -0.37 19.7 76 8 8 4 7 4 3 1  
20 1.34 1.35 84.1 -1.71 -0.33 19.2 77 8 6 3 5 4 3 0  
21 1.89 3.50 86.8 -1.86 -0.41 21.3 78 10 11 5 5 4 2 1  
22 2.81 4.50 87.0 -1.90 -0.37 25.4 75 16 8 2 4 6 3 0  
23 1.85 3.48 87.6 -1.94 -0.43 21.9 78 11 11 5 5 4 3 1  
24 1.88 3.93 90.4 -1.84 -0.39 21.3 79 12 11 5 5 4 2 1  
25 1.41 1.39 91.9 -1.70 -0.35 23.2 73 12 8 1 7 6 3 0  
26 1.78 3.46 98.6 -1.50 -0.10 18.5 75 10 5 5 7 7 3 0  FMN 2701 D
27 1.40 1.39 98.1 -1.69 -0.31 23.1 74 14 8 1 7 6 3 0  
28 1.42 1.40 99.7 -1.74 -0.35 20.4 76 10 11 4 8 4 3 1  
29 1.80 3.02 110.3 -1.59 -0.17 22.4 74 17 7 3 7 9 3 0  FMN 2701 D
30 1.90 2.25 130.9 -1.37 -0.09 19.1 73 16 6 5 11 11 5 0  FMN 701 A FMN 2701 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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