PDBsum entry 2og9 Go to PDB code:  Tunnel analysis for: 2og9 calculated with MOLE 2.0 PDB id 2og9 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.30 1.35 32.6 -0.90 -0.40 16.5 77 3 5 0 1 2 0 0  MSE 286 B MSE 318 B 2 1.31 1.35 34.4 -1.12 -0.17 18.6 70 3 4 0 0 5 0 0  MSE 286 B 3 1.31 1.35 39.7 -1.46 -0.18 22.7 71 4 3 2 2 4 0 0  MSE 286 B 4 1.28 1.39 25.8 -1.24 -0.27 17.4 82 4 2 3 5 1 0 0  MSE 266 A 5 1.26 1.36 38.2 -1.38 -0.24 20.4 81 6 4 2 5 2 0 0  MSE 266 A 6 1.31 1.31 15.6 0.65 0.12 10.2 63 1 1 0 3 3 1 0   7 1.26 1.34 22.5 0.35 0.16 16.5 79 4 1 0 4 0 0 0  MSE 167 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.