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PDBsum entry 2o5e
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Pore analysis for: 2o5e calculated with  MOLE 2.0
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PDB id
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2o5e
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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10 pores,
coloured by radius |
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10 pores,
coloured by radius
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10 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.68 |
2.42 |
34.6 |
-1.60 |
-0.13 |
24.2 |
81 |
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2 |
4 |
3 |
5 |
1 |
1 |
1 |
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2 |
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2.40 |
3.28 |
46.2 |
-2.62 |
-0.70 |
28.1 |
87 |
5 |
3 |
3 |
1 |
0 |
0 |
0 |
DT 7 D TDR 9 D
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3 |
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1.91 |
1.91 |
49.7 |
-1.34 |
-0.70 |
16.6 |
88 |
1 |
3 |
3 |
3 |
0 |
0 |
0 |
DC 6 C DT 7 C
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4 |
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1.67 |
2.55 |
59.3 |
-1.57 |
-0.25 |
21.2 |
81 |
4 |
1 |
2 |
6 |
2 |
1 |
1 |
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5 |
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1.54 |
1.53 |
67.9 |
-2.03 |
-0.60 |
29.5 |
83 |
9 |
9 |
1 |
4 |
0 |
1 |
0 |
DC 6 C DT 7 C
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6 |
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2.52 |
2.51 |
74.8 |
-1.77 |
-0.22 |
25.9 |
81 |
10 |
5 |
3 |
7 |
2 |
1 |
0 |
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7 |
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1.91 |
2.06 |
86.7 |
-1.98 |
-0.42 |
25.6 |
84 |
7 |
5 |
3 |
5 |
1 |
0 |
0 |
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8 |
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1.33 |
2.94 |
110.2 |
-1.49 |
-0.43 |
22.6 |
79 |
9 |
8 |
7 |
8 |
2 |
1 |
2 |
DG 2 C DA 4 C DA 5 C DT 7 C
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9 |
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1.76 |
1.76 |
142.8 |
-2.20 |
-0.47 |
25.3 |
79 |
19 |
8 |
7 |
7 |
5 |
2 |
1 |
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10 |
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1.80 |
1.84 |
154.8 |
-2.33 |
-0.56 |
25.7 |
80 |
16 |
8 |
7 |
5 |
4 |
1 |
1 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program