PDBsum entry 2o5e Go to PDB code:  Tunnel analysis for: 2o5e calculated with MOLE 2.0 PDB id 2o5e Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.23 1.38 25.7 0.77 0.09 8.4 80 1 2 2 6 0 2 0   2 1.18 1.35 27.5 1.09 0.25 7.6 81 1 2 2 7 0 2 0   3 1.25 1.25 30.5 0.94 0.04 5.3 82 2 1 0 8 0 2 0   4 1.19 1.35 32.3 1.15 0.13 4.5 83 2 1 0 9 0 2 0   5 1.31 2.36 18.4 1.24 0.26 1.6 75 0 0 0 5 3 1 0   6 1.28 1.55 19.9 1.62 0.38 3.0 75 0 1 0 5 3 0 0   7 1.20 1.64 25.8 -0.20 -0.12 13.0 80 2 2 1 4 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.