 |
PDBsum entry 2o3f
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 2o3f calculated with  MOLE 2.0
|
PDB id
|
|
|
|
2o3f
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
0 tunnels,
coloured by tunnel radius |
|
5 tunnels,
coloured by
tunnel radius
|
5 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.26 |
1.44 |
19.9 |
1.25 |
0.36 |
8.0 |
73 |
|
2 |
1 |
0 |
6 |
1 |
0 |
0 |
|
MLY 33 A SO4 203 A MSE 12 B MLY 15 B
|
 |
|
2 |
 |
1.25 |
1.92 |
21.1 |
0.46 |
0.09 |
11.8 |
78 |
2 |
1 |
1 |
7 |
0 |
0 |
0 |
MSE 12 B MLY 13 B SO4 207 B
|
|
3 |
 |
1.33 |
1.74 |
17.8 |
1.21 |
0.19 |
7.0 |
71 |
0 |
2 |
1 |
5 |
1 |
0 |
0 |
MLY 33 B MSE 12 C
|
|
4 |
 |
1.33 |
1.74 |
17.9 |
0.53 |
0.02 |
9.9 |
76 |
2 |
1 |
1 |
6 |
0 |
0 |
0 |
MSE 12 C MLY 13 C
|
 |
5 |
 |
1.33 |
1.74 |
23.3 |
0.33 |
0.21 |
14.2 |
71 |
3 |
1 |
0 |
5 |
1 |
0 |
0 |
MLY 33 B SO4 202 B MSE 12 C MLY 15 C
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program