 |
PDBsum entry 2o2x
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 2o2x calculated with  MOLE 2.0
|
PDB id
|
|
|
|
2o2x
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
0 tunnels,
coloured by tunnel radius |
|
4 tunnels,
coloured by
tunnel radius
|
4 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.22 |
1.44 |
17.7 |
-1.27 |
-0.61 |
11.9 |
90 |
|
0 |
2 |
2 |
2 |
0 |
1 |
0 |
|
|
 |
|
2 |
 |
1.20 |
1.36 |
19.1 |
-1.01 |
-0.47 |
14.8 |
90 |
2 |
3 |
2 |
2 |
0 |
1 |
0 |
GOL 219 A
|
|
3 |
 |
1.17 |
1.50 |
21.7 |
-1.58 |
-0.69 |
19.9 |
90 |
1 |
3 |
1 |
2 |
0 |
1 |
0 |
|
 |
4 |
 |
2.38 |
2.48 |
17.0 |
0.01 |
-0.08 |
14.0 |
76 |
3 |
2 |
1 |
3 |
0 |
1 |
1 |
MSE 134 A MSE 141 A
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program