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PDBsum entry 2o2j

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Top Page protein Protein-protein interface(s) tunnels links
Tunnel analysis for: 2o2j calculated with MOLE 2.0 PDB id
2o2j
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.25 1.53 28.9 -1.56 -0.22 15.3 89 4 1 6 5 1 0 0  
2 1.25 1.53 30.9 -2.07 -0.43 17.8 89 4 2 6 3 1 0 0  
3 1.25 1.53 31.8 -1.78 -0.42 16.2 89 5 1 6 2 1 0 0  
4 1.26 1.53 40.4 -1.24 -0.42 5.9 84 3 0 10 4 1 4 0  
5 1.40 1.40 18.5 -0.89 -0.07 17.0 78 3 2 1 3 2 0 0  
6 1.37 1.37 18.9 -0.64 -0.01 13.9 78 4 1 1 3 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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