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PDBsum entry 2nxw
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Tunnel analysis for: 2nxw calculated with  MOLE 2.0
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PDB id
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2nxw
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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12 tunnels,
coloured by tunnel radius |
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8 tunnels,
coloured by
tunnel radius
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8 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.21 |
1.31 |
47.8 |
0.08 |
-0.17 |
6.5 |
81 |
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0 |
4 |
2 |
9 |
5 |
2 |
0 |
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TPP 2002 A
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2 |
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1.19 |
1.34 |
52.0 |
0.17 |
0.00 |
8.6 |
82 |
1 |
3 |
4 |
10 |
5 |
1 |
0 |
TPP 2002 A
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3 |
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1.12 |
1.54 |
58.9 |
0.03 |
0.05 |
7.2 |
82 |
1 |
3 |
5 |
11 |
5 |
1 |
0 |
TPP 2002 A
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4 |
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1.18 |
1.19 |
78.3 |
-0.88 |
-0.37 |
9.0 |
84 |
4 |
6 |
5 |
9 |
5 |
3 |
0 |
TPP 2002 A TPP 2001 B
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5 |
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1.19 |
1.19 |
81.9 |
-0.86 |
-0.36 |
8.9 |
83 |
4 |
6 |
5 |
8 |
5 |
4 |
0 |
TPP 2002 A TPP 2001 B
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6 |
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1.30 |
1.37 |
21.3 |
-1.14 |
-0.30 |
20.2 |
77 |
4 |
2 |
0 |
3 |
1 |
0 |
0 |
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7 |
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1.26 |
1.43 |
25.3 |
-0.32 |
0.09 |
18.1 |
84 |
3 |
2 |
0 |
4 |
1 |
0 |
0 |
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8 |
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1.07 |
1.39 |
29.6 |
-1.46 |
-0.43 |
17.9 |
81 |
4 |
0 |
1 |
1 |
1 |
1 |
0 |
GOL 3001 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program