PDBsum entry 2nx5 Go to PDB code:  Pore analysis for: 2nx5 calculated with MOLE 2.0 PDB id 2nx5 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.17 2.17 45.6 -2.13 -0.57 20.9 86 4 4 8 0 1 2 0   2 1.07 1.07 59.2 -1.56 -0.23 20.3 79 5 5 3 4 3 1 0   3 1.46 1.46 61.0 -1.67 -0.22 16.5 77 3 3 4 2 3 3 0   4 2.48 4.22 65.0 -2.20 -0.57 26.2 87 5 9 5 2 0 2 0   5 2.01 3.95 68.9 -2.15 -0.74 16.5 88 5 5 10 0 1 2 0   6 1.18 1.18 85.3 -1.65 -0.48 18.9 82 7 9 6 4 3 4 0   7 2.49 4.15 89.7 -2.15 -0.67 20.5 90 5 8 11 2 0 3 0   8 2.03 3.09 101.7 -2.51 -0.66 27.3 82 11 13 9 2 2 1 0   9 2.06 2.45 101.1 -2.57 -0.62 24.4 84 11 9 14 2 1 3 0   10 1.52 1.58 116.4 -2.09 -0.62 19.2 81 5 11 10 2 3 3 0   11 2.24 2.23 115.7 -2.38 -0.60 24.9 85 9 13 11 2 1 3 0   12 2.07 2.47 118.5 -2.60 -0.57 26.8 82 12 13 14 2 2 3 0   13 1.31 1.30 118.7 -1.93 -0.58 16.4 86 9 8 15 3 3 4 0   14 1.52 1.58 122.2 -1.61 -0.43 17.2 77 6 9 7 4 8 1 0   15 1.21 1.21 125.8 -1.87 -0.43 21.2 84 10 12 11 6 4 4 0   16 1.19 1.20 134.4 -1.91 -0.46 20.7 83 10 12 10 5 4 3 0   17 2.05 2.22 139.3 -2.51 -0.57 28.5 84 12 16 12 5 1 3 0   18 1.30 1.32 148.2 -1.97 -0.52 23.3 85 11 16 8 5 3 4 0   19 2.06 2.22 151.0 -2.40 -0.59 21.3 83 10 12 14 5 2 5 0   20 2.06 2.22 151.9 -2.53 -0.56 25.7 84 15 13 16 6 1 4 0   21 1.22 1.21 161.6 -2.28 -0.58 23.5 84 14 16 15 3 4 5 0   22 1.23 1.23 162.1 -1.99 -0.56 18.6 82 8 12 13 3 5 5 0   23 2.70 4.16 174.5 -2.47 -0.53 25.2 79 14 14 12 6 4 5 0   24 1.99 3.81 188.3 -2.73 -0.68 28.9 84 17 21 16 3 1 6 0   25 2.72 4.15 192.0 -2.73 -0.68 22.9 85 15 13 21 3 1 8 0   26 1.52 1.58 195.7 -2.51 -0.66 24.6 84 11 19 15 3 2 6 0   27 2.00 3.81 200.8 -2.76 -0.67 26.9 84 19 18 20 4 1 6 0   28 1.52 1.58 208.2 -2.60 -0.65 23.7 84 14 16 19 4 2 6 0   29 2.49 3.73 230.3 -2.65 -0.63 25.9 85 16 20 19 6 1 8 0   30 1.52 2.19 247.5 -2.67 -0.62 24.2 85 19 18 24 7 1 9 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.