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PDBsum entry 2nug
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Tunnel analysis for: 2nug calculated with  MOLE 2.0
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PDB id
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2nug
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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4 tunnels,
coloured by tunnel radius |
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4 tunnels,
coloured by
tunnel radius
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4 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.42 |
1.42 |
29.5 |
-1.32 |
-0.40 |
13.3 |
93 |
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1 |
3 |
3 |
4 |
0 |
1 |
0 |
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G 12 C U 10 D C 11 D A 17 F G 18 F
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2 |
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1.43 |
1.42 |
30.6 |
-1.56 |
-0.50 |
14.1 |
94 |
1 |
3 |
3 |
5 |
0 |
1 |
0 |
U 10 C C 11 C G 12 D A 17 E G 18 E
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3 |
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1.45 |
1.45 |
16.8 |
-0.22 |
-0.24 |
11.7 |
86 |
3 |
0 |
0 |
3 |
0 |
0 |
0 |
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4 |
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1.28 |
2.07 |
23.0 |
2.12 |
0.81 |
2.9 |
70 |
1 |
0 |
1 |
6 |
5 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program