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PDBsum entry 2nox

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Pore analysis for: 2nox calculated with MOLE 2.0 PDB id
2nox
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 24 pores, coloured by radius 24 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.33 1.51 26.6 -2.65 -0.71 26.8 76 2 6 2 1 2 0 0  
2 2.07 2.43 52.4 -1.82 -0.49 25.2 84 5 5 2 4 0 2 0  
3 1.47 1.60 59.4 -0.98 -0.25 20.1 76 6 7 2 6 3 2 0  
4 1.35 1.50 84.8 -2.41 -0.49 25.1 86 13 8 9 9 1 2 0  
5 1.16 2.76 85.5 -1.15 -0.06 18.1 80 8 6 5 13 6 2 0  HEM 500 P
6 1.35 1.51 86.1 -2.19 -0.37 31.6 84 14 11 4 7 0 2 0  
7 1.22 1.28 94.7 -1.10 0.01 20.1 84 10 6 5 12 7 0 0  HEM 500 N
8 1.20 1.59 96.6 -1.30 -0.16 15.6 82 8 7 11 14 5 3 0  HEM 500 P
9 1.32 3.55 99.6 -1.18 -0.19 16.9 84 10 8 10 16 4 1 0  HEM 500 B
10 1.34 1.54 119.8 -2.25 -0.47 24.9 86 18 11 11 11 1 2 0  
11 1.20 1.34 129.4 -1.44 -0.11 17.9 84 13 10 14 17 5 1 0  HEM 500 M
12 1.27 1.57 128.7 -1.84 -0.38 19.3 86 16 9 14 14 4 5 0  
13 1.26 2.68 131.5 -1.13 -0.07 18.6 82 14 7 9 19 8 4 0  HEM 500 B
14 1.24 3.37 153.7 -1.29 -0.16 17.7 80 12 14 11 18 12 3 0  HEM 500 E
15 1.33 1.32 155.7 -0.99 0.03 15.7 81 13 11 11 19 8 3 0  HEM 500 I HEM 500 M
16 1.69 4.02 183.8 -1.50 -0.22 16.9 82 14 12 12 14 8 5 0  HEM 500 M
17 1.20 3.39 182.8 -1.04 0.01 17.4 79 14 10 8 16 9 3 0  HEM 500 K
18 1.20 1.47 203.8 -1.01 -0.09 14.4 84 14 10 13 18 7 1 0  HEM 500 F
19 1.19 3.42 204.3 -1.57 -0.24 21.1 83 21 19 14 19 8 7 0  HEM 500 E
20 1.37 1.59 209.3 -1.70 -0.20 20.3 80 17 17 16 19 13 4 0  HEM 500 E HEM 500 M
21 1.18 1.62 220.7 -1.36 -0.10 19.9 80 19 17 14 25 17 4 0  HEM 500 E HEM 500 M
22 1.34 1.43 226.4 -1.75 -0.31 20.0 83 20 15 14 14 6 8 0  HEM 500 M
23 1.22 2.97 310.1 -1.18 -0.01 15.8 79 27 14 22 32 23 5 0  HEM 500 A HEM 500 O HEM 500 P
24 1.25 1.37 329.6 -1.08 0.00 14.6 80 23 13 21 34 24 6 0  HEM 500 G HEM 500 H HEM 500 M

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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