spacer
spacer

PDBsum entry 2nnh

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 2nnh calculated with MOLE 2.0 PDB id
2nnh
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
1 pore, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.87 5.87 33.1 -2.23 -0.49 23.0 84 5 1 4 2 1 1 0  
2 1.42 1.49 50.5 1.18 0.14 3.5 87 3 0 4 12 0 1 1  HEM 500 A 9CR 501 A 9CR 502 A SO4 505 A
3 1.61 1.68 84.3 -0.05 -0.13 11.0 81 7 3 4 17 3 1 1  HEM 500 B 9CR 501 B 9CR 502 B SO4 504 B
4 1.43 1.49 92.8 -0.03 -0.14 10.7 83 8 2 4 17 0 1 1  HEM 500 A 9CR 501 A 9CR 502 A SO4 505 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer