PDBsum entry 2my5 Go to PDB code:  Tunnel analysis for: 2my5 calculated with MOLE 2.0 PDB id 2my5 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.16 1.26 24.8 2.61 0.95 3.3 78 1 0 1 8 3 0 0  PN7 101 A 2 1.38 1.51 25.5 2.18 0.89 4.8 77 1 0 1 8 4 1 0   3 1.27 2.69 27.1 2.87 1.03 0.6 78 0 0 1 8 4 1 0   4 1.37 1.51 27.7 2.66 1.01 6.4 83 1 1 1 10 3 0 0   5 1.37 1.51 28.4 2.73 0.94 3.4 80 1 0 1 9 4 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.