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PDBsum entry 2ms2

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Top Page protein Protein-protein interface(s) tunnels links
Tunnel analysis for: 2ms2 calculated with MOLE 2.0 PDB id
2ms2
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.14 1.40 20.6 2.02 0.61 3.8 82 0 1 1 10 1 1 0  
2 1.14 1.40 21.6 2.42 0.72 1.0 83 0 0 1 9 1 0 0  
3 1.14 1.40 25.2 2.19 0.77 1.1 81 0 0 1 12 2 0 0  
4 1.14 1.40 28.3 1.41 0.43 3.9 76 1 1 1 8 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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