PDBsum entry 2mqe Go to PDB code:  Tunnel analysis for: 2mqe calculated with MOLE 2.0 PDB id 2mqe Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.26 1.41 16.0 -2.37 -0.64 25.3 90 2 2 2 1 1 0 0   2 1.26 1.41 17.7 -1.97 -0.52 23.3 83 2 1 2 2 2 0 0   3 1.36 1.60 17.7 2.24 0.82 6.8 77 1 0 0 8 0 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.