PDBsum entry 2mpf

Tunnel analysis for: 2mpf calculated with

MOLE 2.0

PDB id

2mpf

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

7 tunnels, coloured by tunnel radius

7 tunnels, coloured by tunnel radius

7 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.15

1.21

27.2

-0.20

-0.15

13.0

81

4

2

1

6

2

0

0

2

1.16

1.21

31.5

0.07

-0.05

12.4

83

2

2

1

6

2

0

0

3

1.15

1.21

33.6

0.12

-0.08

12.1

83

3

3

2

6

2

1

0

4

1.15

1.21

33.7

-0.30

-0.10

17.5

83

4

2

1

6

2

0

0

5

1.15

1.23

39.5

0.37

-0.12

8.2

85

2

2

2

8

1

1

0

6

1.15

1.21

40.6

0.08

-0.14

11.1

86

3

3

3

7

1

1

0

7

1.16

1.21

55.8

-0.12

-0.01

14.4

81

3

3

0

7

2

1

1

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.