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PDBsum entry 2l6t

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Antiviral protein PDB id
2l6t
Contents
Protein chain
20 a.a.

References listed in PDB file
Key reference
Title Short-Term monotherapy in HIV-Infected patients with a virus entry inhibitor against the gp41 fusion peptide.
Authors W.G.Forssmann, Y.H.The, M.Stoll, K.Adermann, U.Albrecht, H.C.Tillmann, K.Barlos, A.Busmann, A.Canales-Mayordomo, G.Giménez-Gallego, J.Hirsch, J.Jiménez-Barbero, D.Meyer-Olson, J.Münch, J.Pérez-Castells, L.Ständker, F.Kirchhoff, R.E.Schmidt.
Ref. Sci Transl Med, 2010, 2, 63re3-63re3. [DOI no: 10.1126/scitranslmed.3001697]
PubMed id 21178138
Abstract
No abstract given.
Secondary reference #1
Title Discovery and optimization of a natural HIV-1 entry inhibitor targeting the gp41 fusion peptide.
Authors J.Münch, L.Ständker, K.Adermann, A.Schulz, M.Schindler, R.Chinnadurai, S.Pöhlmann, C.Chaipan, T.Biet, T.Peters, B.Meyer, D.Wilhelm, H.Lu, W.Jing, S.Jiang, W.G.Forssmann, F.Kirchhoff.
Ref. Cell, 2007, 129, 263-275. [DOI no: 10.1016/j.cell.2007.02.042]
PubMed id 17448989
Full text Abstract
Figure 4.
Figure 4. Improved Antiviral Potency of VIRIP Derivatives
(A) P4-CCR5 indicator cells were infected with NL4-3 stocks containing 1.0 ng p24 antigen in the presence of VIRIP, a variety of VIRIP derivatives (amino acid sequence shown in left panel; p, D-proline; cysteine residues are linked via a disulfide bridge), or T20. Average values obtained from quintuple infections are shown (right panel). The results were confirmed in two to five independent experiments.
(B and C) Dose-dependent inhibition of (B) primary HIV-1 isolates of different subtype and coreceptor usage (indicated in parentheses) or (C) RT-, protease-, and T20-resistant HIV-1 variants by VIR-576. NL4-3wt inhibition by VIRIP and T20 is shown for comparison. All curves give average values obtained from triplicate infections. Similar results were obtained in two independent experiments.
(D and E) Inhibition of R5-tropic HIV-1 replication in ex vivo infected human tonsillary lymphocyte aggregate cultures by (D) VIR-353 and VIR-576 and (E) T20. Shown are average luciferase activities in culture supernatants derived from triplicate infections. Similar results were obtained with another R5-tropic HIV-1 clone and X4-tropic NL4-3wt. RLU/s, relative light units per second. Figure 4. Improved Antiviral Potency of VIRIP Derivatives(A) P4-CCR5 indicator cells were infected with NL4-3 stocks containing 1.0 ng p24 antigen in the presence of VIRIP, a variety of VIRIP derivatives (amino acid sequence shown in left panel; p, D-proline; cysteine residues are linked via a disulfide bridge), or T20. Average values obtained from quintuple infections are shown (right panel). The results were confirmed in two to five independent experiments.(B and C) Dose-dependent inhibition of (B) primary HIV-1 isolates of different subtype and coreceptor usage (indicated in parentheses) or (C) RT-, protease-, and T20-resistant HIV-1 variants by VIR-576. NL4-3wt inhibition by VIRIP and T20 is shown for comparison. All curves give average values obtained from triplicate infections. Similar results were obtained in two independent experiments.(D and E) Inhibition of R5-tropic HIV-1 replication in ex vivo infected human tonsillary lymphocyte aggregate cultures by (D) VIR-353 and VIR-576 and (E) T20. Shown are average luciferase activities in culture supernatants derived from triplicate infections. Similar results were obtained with another R5-tropic HIV-1 clone and X4-tropic NL4-3wt. RLU/s, relative light units per second.
Figure 5.
Figure 5. Inhibitory Mechanism of VIRIP
(A) Inhibition of HIV-1 Env-mediated cell fusion by the indicated peptides. Identical symbols are also used in (B)–(D). Average values of triplicate measurements are shown in (A)–(C).
(B) Inhibitory effect of VIRIP derivatives and fusion inhibitors on gp41 6-HB formation.
(C) Inhibitory effect of VIRIP derivatives and T20 on hemolysis induced by HIV-1, SIV/HIV-2, and MLV FPs.
(D) Inhibition of NL4-3wt, an NL4-3 chimera containing the SIV/HIV-2 FP and SIVmac239, by various VIRIP derivatives and T20. The upper panel shows an alignment of the gp41 FP sequences of HIV-1 and SIV/HIV-2. Dashes and the dot indicate amino acid identity and a gap, respectively. Average values obtained from sextuple infections of P4-CCR5 indicator cells are shown. Figure 5. Inhibitory Mechanism of VIRIP(A) Inhibition of HIV-1 Env-mediated cell fusion by the indicated peptides. Identical symbols are also used in (B)–(D). Average values of triplicate measurements are shown in (A)–(C).(B) Inhibitory effect of VIRIP derivatives and fusion inhibitors on gp41 6-HB formation.(C) Inhibitory effect of VIRIP derivatives and T20 on hemolysis induced by HIV-1, SIV/HIV-2, and MLV FPs.(D) Inhibition of NL4-3wt, an NL4-3 chimera containing the SIV/HIV-2 FP and SIVmac239, by various VIRIP derivatives and T20. The upper panel shows an alignment of the gp41 FP sequences of HIV-1 and SIV/HIV-2. Dashes and the dot indicate amino acid identity and a gap, respectively. Average values obtained from sextuple infections of P4-CCR5 indicator cells are shown.
The above figures are reproduced from the cited reference with permission from Cell Press
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