PDBsum entry 2kjc Go to PDB code:  Tunnel analysis for: 2kjc calculated with MOLE 2.0 PDB id 2kjc Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.43 1.57 24.3 0.08 0.15 11.3 88 3 0 2 6 0 0 0   2 1.43 1.54 25.7 0.05 0.17 13.5 88 2 1 3 5 0 0 0   3 1.12 1.33 30.3 1.44 0.57 2.5 82 0 1 2 7 2 0 0   4 1.43 1.54 34.5 0.87 0.25 6.8 84 2 1 3 9 0 0 0   5 1.43 1.48 41.1 1.53 0.59 8.1 84 2 1 3 12 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.