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PDBsum entry 2k04

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Cytokine PDB id
2k04
Contents
Protein chains
68 a.a.
38 a.a.

References listed in PDB file
Key reference
Title Structural basis of cxcr4 sulfotyrosine recognition by the chemokine sdf-1/cxcl12.
Authors C.T.Veldkamp, C.Seibert, F.C.Peterson, N.B.De la cruz, J.C.Haugner, H.Basnet, T.P.Sakmar, B.F.Volkman.
Ref. Sci Signal, 2008, 1, ra4.
PubMed id 18799424
Abstract
Stem cell homing and breast cancer metastasis are orchestrated by the chemokine stromal cell-derived factor 1 (SDF-1) and its receptor CXCR4. Here, we report the nuclear magnetic resonance structure of a constitutively dimeric SDF-1 in complex with a CXCR4 fragment that contains three sulfotyrosine residues important for a high-affinity ligand-receptor interaction. CXCR4 bridged the SDF-1 dimer interface so that sulfotyrosines sTyr7 and sTyr12 of CXCR4 occupied positively charged clefts on opposing chemokine subunits. Dimeric SDF-1 induced intracellular Ca2+ mobilization but had no chemotactic activity; instead, it prevented native SDF-1-induced chemotaxis, suggesting that it acted as a potent partial agonist. Our work elucidates the structural basis for sulfotyrosine recognition in the chemokine-receptor interaction and suggests a strategy for CXCR4-targeted drug development.
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