PDBsum entry 2jr4 Go to PDB code:  Tunnel analysis for: 2jr4 calculated with MOLE 2.0 PDB id 2jr4 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels Length Hydropathy Hydrophobicity Polarity Mutability Residue..type Ligands Radius 1 2.42 6.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  30 C A,31 C A,32 C A 2 1.32 10.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  27 C A,28 C A,29 U A,30 C A,39 G A,42 G A 3 1.31 14.8 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  29 U A,30 C A,31 C A,32 C A 4 1.31 15.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  29 U A,30 C A,31 C A,32 C A,38 A A,39 G A,40 G A 5 2.61 19.0 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  27 C A,28 C A,29 U A,30 C A,31 C A,32 C A,38 A A, 39 G A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.