PDBsum entry 2jlt Go to PDB code:  Tunnel analysis for: 2jlt calculated with MOLE 2.0 PDB id 2jlt Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels Length Hydropathy Hydrophobicity Polarity Mutability Residue..type Ligands Radius 1 2.85 18.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  8 C A,3 A B,4 G B,5 C B,6 C B,7 U B,8 G B,9 G B, 10 G B 2 3.09 20.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  8 C A,1 G B,2 G B,4 G B,5 C B,6 C B,7 U B,8 G B,9 G B,10 G B,11 A B,12 G B,13 C B 3 2.43 21.8 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  4 C A,5 G A,6 G A,8 C A,9 C A,10 C A,12 G A,6 C B, 7 U B 4 2.14 29.8 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  2 G A,3 5BU A,4 C A,5 G A,6 G A,8 C A,9 C A,10 C A,11 A A,12 G A,6 C B,7 U B 5 2.42 34.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  1 G A,2 G A,3 5BU A,4 C A,5 G A,6 G A,8 C A,9 C A, 10 C A,11 A A,12 G A,13 A A,14 C A,6 C B,7 U B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.