PDBsum entry 2jcc Go to PDB code:  Tunnel analysis for: 2jcc calculated with MOLE 2.0 PDB id 2jcc Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.39 1.59 16.3 -0.83 0.05 9.9 65 1 1 1 3 4 0 0   2 1.39 1.38 19.1 -1.60 -0.43 21.9 80 5 2 1 2 1 0 0   3 1.10 3.08 20.2 -2.56 -0.47 33.0 79 4 3 1 2 1 0 0   4 1.17 1.42 15.2 -0.48 -0.16 14.6 67 1 1 0 4 1 2 0   5 1.16 2.28 17.7 0.11 0.07 11.6 66 1 1 0 4 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.