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PDBsum entry 2jb3

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 2jb3 calculated with MOLE 2.0 PDB id
2jb3
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.45 2.29 30.8 1.09 0.36 6.1 76 1 2 1 6 2 0 0  
2 1.45 1.51 46.8 -1.68 -0.36 14.0 81 3 2 6 6 6 0 0  
3 1.99 2.14 47.6 -0.93 -0.15 14.3 72 4 4 1 7 4 2 0  FAD 1489 B BE2 1490 B
4 1.14 1.20 79.7 -0.83 -0.27 10.2 81 5 4 5 5 6 0 0  
5 1.89 2.02 82.4 -1.42 -0.25 18.1 74 7 6 2 6 6 2 0  FAD 1489 A BE2 1490 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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