PDBsum entry 2jb3 Go to PDB code:  Tunnel analysis for: 2jb3 calculated with MOLE 2.0 PDB id 2jb3 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.42 1.65 34.0 -0.78 -0.13 9.6 80 3 1 4 3 4 0 0   2 1.49 1.55 44.8 -1.30 -0.26 14.7 80 4 2 5 5 5 0 0   3 1.18 1.24 58.4 -0.49 -0.22 6.9 79 2 4 4 7 6 0 0   4 1.37 1.57 21.1 -1.41 -0.13 17.7 76 2 2 0 1 1 1 0   5 0.94 0.94 17.6 -1.55 -0.59 18.4 91 2 1 2 0 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.