 |
PDBsum entry 2jb2
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 2jb2 calculated with  MOLE 2.0
|
PDB id
|
|
|
|
2jb2
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
3 pores,
coloured by radius |
|
6 pores,
coloured by radius
|
6 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.22 |
1.24 |
36.9 |
-0.62 |
-0.21 |
4.2 |
81 |
|
1 |
1 |
6 |
5 |
5 |
0 |
0 |
|
|
 |
|
2 |
 |
1.58 |
1.62 |
68.1 |
-1.09 |
-0.09 |
11.4 |
76 |
3 |
4 |
5 |
8 |
6 |
3 |
0 |
FAD 1489 A PHE 1490 A
|
|
3 |
 |
1.76 |
4.05 |
69.7 |
-1.15 |
-0.25 |
16.5 |
74 |
5 |
4 |
2 |
6 |
4 |
2 |
0 |
FAD 1489 B PHE 1490 B
|
|
4 |
 |
1.20 |
3.75 |
73.4 |
-0.55 |
-0.12 |
9.1 |
77 |
4 |
5 |
3 |
10 |
6 |
2 |
0 |
FAD 1489 A
|
|
5 |
 |
1.20 |
1.29 |
81.7 |
-0.77 |
-0.12 |
7.0 |
80 |
2 |
3 |
11 |
6 |
8 |
1 |
0 |
PHE 1490 A
|
 |
6 |
 |
1.51 |
1.59 |
92.4 |
-1.56 |
-0.25 |
11.7 |
80 |
5 |
3 |
13 |
7 |
10 |
1 |
0 |
PHE 1490 A
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program