PDBsum entry 2j8s Go to PDB code:  Pore analysis for: 2j8s calculated with MOLE 2.0 PDB id 2j8s Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   29 pores, coloured by radius 18 pores, coloured by radius 18 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.50 1.49 36.4 -1.00 -0.37 13.8 84 4 3 3 4 0 1 0   2 1.38 1.38 48.4 -0.36 -0.01 9.2 76 2 2 6 3 6 2 0   3 1.25 1.47 49.3 -1.37 -0.63 12.6 84 4 3 5 3 0 2 0   4 2.04 2.25 55.1 -0.44 -0.43 4.9 83 0 3 6 5 4 2 0  LMT 3046 C 5 1.33 1.41 65.6 -0.82 -0.59 7.5 89 0 4 7 8 2 2 0   6 1.18 1.48 67.3 -0.70 -0.46 8.4 89 1 5 5 7 1 2 0   7 1.46 2.07 79.1 -2.59 -0.62 30.6 82 11 11 4 2 2 0 0   8 1.40 1.41 79.5 -1.61 -0.62 15.3 87 5 6 10 4 1 2 0  LMT 3046 C 9 1.36 1.44 83.5 -1.15 -0.36 15.1 84 6 5 11 8 1 2 0   10 1.47 1.46 83.4 -0.96 -0.31 13.9 82 5 5 12 7 4 2 0   11 1.20 1.46 99.4 -1.36 -0.63 10.6 89 2 5 14 4 4 4 0   12 1.44 1.56 118.2 -1.08 -0.40 10.5 82 4 5 20 5 7 4 0   13 1.38 1.55 118.3 -1.20 -0.44 11.1 84 5 5 19 6 4 4 0   14 2.03 3.61 154.0 -1.30 -0.40 18.3 82 11 10 6 7 5 3 0  LMT 3046 C 15 1.50 2.07 152.7 -1.05 -0.24 20.5 80 14 8 4 15 3 3 0  LMT 3046 A LMU 3049 A LMT 3037 B 16 1.09 1.20 223.6 -0.71 -0.36 14.1 86 9 12 14 24 4 2 0  LMT 3046 A LMU 3049 A LMT 3046 C 17 1.34 1.77 388.0 -1.42 -0.34 20.0 83 25 19 14 24 6 6 0  LMT 3046 A LMU 3049 A LMT 3037 B 18 1.50 1.51 30.7 -2.49 -0.49 36.5 84 8 4 1 2 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.