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PDBsum entry 2j8c

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 2j8c calculated with MOLE 2.0 PDB id
2j8c
Pores calculated on whole structure Pores calculated excluding ligands

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0 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.96 5.55 28.5 0.06 0.71 19.3 71 4 0 1 5 5 0 0  BCL 1288 L BCL 1303 M BCL 1304 M BPH 1308 M SPO
1310 M
2 1.11 1.34 31.6 -1.36 -0.56 18.7 85 2 4 3 3 1 1 0  U10 1287 L
3 2.88 4.50 32.4 0.91 0.87 11.3 72 4 0 1 9 5 0 0  BCL 1282 L BCL 1288 L BCL 1303 M BCL 1304 M BPH
1308 M SPO 1310 M
4 1.41 1.43 84.2 0.26 0.12 14.0 72 4 8 0 16 6 3 0  LDA 1285 L U10 1287 L BCL 1303 M BCL 1304 M BPH
1308 M PC1 1312 M

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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