PDBsum entry 2j4y Go to PDB code:  Pore analysis for: 2j4y calculated with MOLE 2.0 PDB id 2j4y Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.41 1.58 29.0 2.15 0.93 0.9 61 0 0 1 5 7 0 0   2 1.19 1.87 47.2 -1.14 -0.24 12.7 75 5 1 2 2 4 1 0   3 1.41 1.41 48.0 -1.03 -0.18 12.0 68 5 1 1 1 2 1 2   4 1.48 1.63 81.6 -0.08 0.26 11.6 72 5 1 2 8 8 1 0   5 1.40 1.57 94.6 0.10 0.32 10.5 70 5 1 2 7 9 1 2   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.