PDBsum entry 2j1k Go to PDB code:  Pore analysis for: 2j1k calculated with MOLE 2.0 PDB id 2j1k Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   14 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.76 3.37 33.1 -1.42 -0.49 15.2 89 3 3 5 3 0 2 0   2 1.76 1.88 44.6 -2.36 -0.48 23.6 84 4 4 3 0 1 2 0   3 2.77 3.35 50.5 -1.75 -0.76 11.9 92 2 3 7 0 0 1 0   4 2.83 3.01 54.7 -1.68 -0.68 14.5 96 2 4 11 2 0 1 0   5 2.40 3.66 55.6 -1.78 -0.25 23.4 87 4 5 4 4 0 2 0   6 1.86 2.52 64.2 -1.22 -0.26 17.6 85 5 4 6 5 2 3 0   7 0.92 1.36 122.9 -1.24 -0.44 15.5 87 9 7 12 8 2 4 0   8 0.96 1.49 129.0 -1.20 -0.37 14.6 87 8 6 11 10 2 6 0   9 1.18 1.34 159.4 -1.06 -0.30 15.6 86 11 8 11 11 3 5 0   10 2.18 2.27 69.1 -1.31 -0.56 16.1 89 7 5 8 6 0 3 0   11 2.17 2.31 95.1 -1.21 -0.57 12.7 89 6 4 8 6 0 4 0   12 1.23 1.61 30.6 -1.65 -0.51 21.5 81 3 3 5 2 2 1 0   13 1.16 1.81 34.1 -0.96 -0.40 15.2 83 3 3 4 2 2 1 0   14 1.11 1.62 53.5 -1.38 -0.50 17.6 81 5 4 4 1 2 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.