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PDBsum entry 2ix3

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Pore analysis for: 2ix3 calculated with MOLE 2.0 PDB id
2ix3
Pores calculated on whole structure Pores calculated excluding ligands

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21 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.02 2.02 29.3 -1.15 -0.36 20.5 78 3 3 1 6 0 3 0  
2 1.48 1.48 29.5 -1.31 -0.28 24.8 86 5 3 0 3 1 0 0  
3 2.01 2.18 33.5 -0.97 -0.45 15.0 86 4 5 1 4 0 0 0  
4 1.29 1.30 35.6 -1.02 -0.26 14.3 77 2 3 3 3 2 1 0  
5 1.33 1.33 37.9 -1.43 -0.30 26.6 83 4 3 0 4 1 0 0  
6 1.38 1.38 41.3 -1.71 -0.56 26.3 75 5 6 0 3 0 2 0  
7 3.04 4.18 41.5 -2.71 -0.61 35.5 83 7 6 4 2 0 0 0  
8 1.72 1.71 55.5 -1.13 -0.35 19.2 73 3 5 0 4 1 2 1  
9 1.35 1.32 61.6 -0.44 -0.14 13.1 77 6 5 3 5 2 3 0  
10 3.00 3.88 62.5 -2.28 -0.30 30.9 86 8 8 7 6 1 0 0  SO4 2976 A
11 2.12 2.81 66.4 -1.74 -0.37 28.1 83 8 11 4 7 1 1 0  
12 2.22 2.15 72.4 -1.73 -0.43 23.9 86 7 7 7 10 1 1 0  
13 2.08 4.16 77.8 -2.21 -0.40 29.0 83 9 8 6 5 1 1 0  SO4 2976 A
14 2.12 4.09 78.8 -2.08 -0.36 27.4 86 8 7 7 7 1 1 0  
15 2.97 4.42 84.3 -1.80 -0.36 25.2 82 10 14 8 9 1 3 0  SO4 2976 A
16 2.12 4.09 83.6 -1.75 -0.34 26.2 85 10 8 6 7 0 1 0  
17 2.85 3.42 86.9 -2.41 -0.38 29.0 85 11 9 12 8 2 0 0  SO4 2976 A
18 2.20 4.09 88.2 -2.25 -0.46 30.2 82 10 13 4 6 0 4 0  SO4 2976 A
19 2.77 3.91 91.7 -2.04 -0.35 27.7 84 13 10 12 8 1 0 0  SO4 2976 A
20 2.14 4.09 91.8 -1.74 -0.37 27.9 83 11 11 3 8 0 3 0  
21 2.27 3.87 92.4 -1.34 -0.34 25.9 80 10 12 2 9 0 3 0  
22 2.26 3.16 96.3 -1.97 -0.47 29.6 84 10 14 6 7 1 1 0  
23 2.24 3.71 98.6 -1.72 -0.38 25.2 83 10 11 8 9 1 3 0  
24 2.80 2.89 114.2 -1.93 -0.44 26.3 82 12 17 10 9 1 4 0  SO4 2976 A
25 1.17 1.78 153.4 -1.88 -0.37 25.6 82 17 14 13 12 1 4 0  SO4 2976 A
26 2.57 2.73 159.0 -1.61 -0.38 25.2 83 15 18 7 15 1 1 0  SO4 2976 A
27 2.28 4.10 162.9 -1.87 -0.44 28.5 83 15 17 3 12 0 2 0  SO4 2976 A
28 2.59 3.27 163.5 -1.96 -0.43 28.5 83 19 16 7 14 0 1 0  SO4 2976 A
29 1.20 1.96 168.4 -1.78 -0.37 26.6 79 20 17 8 13 0 5 0  SO4 2976 A
30 1.27 1.29 185.0 -1.68 -0.35 25.9 80 19 19 7 12 1 9 0  SO4 2976 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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