 |
PDBsum entry 2iu8
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 2iu8 calculated with MOLE 2.0
|
PDB id
|
|
|
|
2iu8
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
4 pores,
coloured by radius |
 |
4 pores,
coloured by radius
|
4 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.39 |
3.54 |
40.1 |
0.28 |
-0.12 |
5.3 |
86 |
 |
4 |
0 |
1 |
8 |
2 |
1 |
0 |
 |
PLM 1349 A PLM 1351 C
|
 |
 |
2 |
 |
2.80 |
3.45 |
42.6 |
-1.75 |
0.09 |
26.3 |
83 |
7 |
0 |
1 |
3 |
2 |
2 |
0 |
PLM 1349 A UD1 1348 B
|
 |
3 |
 |
1.19 |
2.53 |
104.0 |
-0.77 |
-0.09 |
15.3 |
87 |
11 |
5 |
6 |
12 |
4 |
2 |
1 |
PLM 1349 A UD1 1348 B PLM 1349 B
|
 |
4 |
 |
1.25 |
1.42 |
32.7 |
-1.91 |
-0.30 |
27.6 |
76 |
9 |
1 |
1 |
2 |
1 |
1 |
1 |
BME 1351 A
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |