PDBsum entry 2ikb Go to PDB code:  Tunnel analysis for: 2ikb calculated with MOLE 2.0 PDB id 2ikb Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.34 1.56 16.2 -0.48 -0.09 7.2 85 2 0 0 2 2 0 0   2 1.21 1.21 18.4 -0.19 -0.04 3.9 83 1 0 0 3 3 0 0   3 1.33 1.57 18.7 -0.79 -0.17 8.7 87 2 0 1 2 2 0 0   4 1.34 1.56 25.6 -0.71 -0.27 7.4 90 1 1 1 2 2 0 0   5 1.33 1.56 27.0 -0.21 -0.29 2.8 91 0 1 1 4 2 0 0   6 1.21 1.21 28.0 -0.21 -0.21 2.2 90 0 0 1 5 3 0 0   7 1.33 1.56 28.7 -0.24 -0.25 5.0 83 1 0 0 3 4 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.