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PDBsum entry 2ign

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 2ign calculated with MOLE 2.0 PDB id
2ign
Pores calculated on whole structure Pores calculated excluding ligands

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19 pores, coloured by radius 19 pores, coloured by radius 19 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.80 3.83 38.1 -0.44 -0.10 15.1 87 2 2 2 2 1 2 0  
2 1.36 1.64 61.1 -1.16 -0.52 14.0 89 3 4 8 6 1 2 0  
3 1.83 2.16 68.9 -0.83 -0.51 11.6 89 2 4 11 6 1 2 0  
4 1.35 1.60 71.8 -0.03 -0.30 9.2 87 1 4 6 8 1 4 0  
5 1.28 1.63 76.4 -0.08 -0.28 10.4 88 1 4 6 11 0 4 0  
6 1.26 1.62 90.1 -0.19 -0.30 11.9 88 2 4 8 11 1 4 0  
7 1.73 2.85 38.7 -1.66 -0.65 20.5 86 4 4 2 3 0 0 0  
8 1.62 2.75 39.4 -1.21 -0.12 21.9 86 4 2 3 4 1 0 0  
9 1.62 2.75 46.2 -1.62 -0.25 22.3 87 5 2 4 4 1 0 0  
10 1.66 1.95 63.7 -1.35 -0.45 20.8 84 7 5 2 3 1 0 0  
11 1.38 1.63 81.7 -1.32 -0.67 13.2 91 3 4 13 6 2 2 0  
12 1.33 1.59 82.8 -1.23 -0.62 14.3 89 4 4 12 5 1 2 0  
13 1.41 1.61 84.6 -0.46 -0.38 13.2 88 2 4 8 10 1 4 0  
14 1.37 1.63 87.0 -0.77 -0.52 11.7 88 4 5 12 5 2 2 0  
15 1.28 2.31 88.8 -0.91 -0.34 15.7 85 6 5 8 8 2 2 0  
16 1.37 1.60 88.6 -0.94 -0.53 13.2 89 3 5 13 7 1 2 0  
17 2.88 3.63 97.2 -0.71 -0.50 10.4 92 5 6 16 7 2 0 0  
18 1.48 1.63 116.7 -0.41 -0.33 12.2 87 6 6 12 11 3 2 0  
19 1.56 1.96 124.8 -0.89 -0.49 12.4 89 7 7 16 8 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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