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PDBsum entry 2ide

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 2ide calculated with MOLE 2.0 PDB id
2ide
Pores calculated on whole structure Pores calculated excluding ligands

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10 pores, coloured by radius 18 pores, coloured by radius 18 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.37 2.42 25.8 -0.96 -0.55 14.6 75 4 3 0 0 2 1 0  
2 1.37 2.27 28.0 -1.42 -0.27 24.0 76 5 5 0 4 0 3 1  PO4 2202 E
3 1.45 2.15 34.6 -1.27 -0.29 21.5 78 6 6 1 4 0 3 1  PO4 2206 A
4 1.56 1.78 53.6 -2.00 -0.60 29.3 77 9 8 0 0 2 1 0  
5 1.14 1.37 60.9 -1.51 -0.52 22.8 78 5 8 0 5 2 3 0  PO4 2205 E
6 1.28 2.18 62.6 -1.55 -0.53 23.7 79 10 8 0 4 1 1 1  PO4 2208 H
7 1.56 1.75 82.2 -1.74 -0.64 19.1 71 6 13 0 0 1 13 0  
8 1.27 2.19 85.5 -1.46 -0.55 16.1 74 4 12 0 4 0 12 1  PO4 2208 H
9 1.54 1.76 86.2 -1.92 -0.63 21.2 71 7 16 0 0 1 13 0  
10 1.73 1.99 86.9 -1.60 -0.64 17.8 73 5 14 0 1 1 12 0  
11 1.58 2.54 88.0 -1.75 -0.63 19.2 72 2 16 0 0 1 12 0  
12 1.16 1.34 93.5 -1.06 -0.42 14.3 76 10 7 1 8 1 6 2  PO4 2212 G PO4 2208 H
13 1.19 1.54 95.3 -1.67 -0.59 21.6 76 7 15 0 4 2 9 1  PO4 2202 E
14 1.17 1.38 96.7 -1.80 -0.64 21.6 72 6 15 0 4 0 15 0  PO4 2205 E
15 1.34 1.38 113.5 -1.75 -0.62 19.1 71 7 17 0 4 0 18 1  PO4 2212 G
16 1.29 1.28 118.6 -1.13 -0.39 16.4 70 8 13 0 14 0 15 0  
17 1.56 2.59 122.9 -1.90 -0.67 19.6 69 3 23 0 0 0 24 0  
18 1.27 1.52 126.1 -1.87 -0.58 23.7 75 14 16 1 3 2 10 1  PO4 2202 E

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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