PDBsum entry 2ibm Go to PDB code:  Pore analysis for: 2ibm calculated with MOLE 2.0 PDB id 2ibm Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.58 1.60 46.4 -2.27 -0.67 24.0 86 7 5 3 2 0 0 0   2 1.17 1.34 51.5 -1.89 -0.49 24.2 85 7 6 2 3 0 0 0   3 1.55 1.54 54.2 -1.89 -0.65 21.9 86 9 5 3 2 1 0 0  ADP 781 A 4 1.28 2.38 56.3 -2.50 -0.54 32.5 84 13 9 3 3 0 0 0   5 1.60 1.63 66.3 -1.93 -0.69 20.2 86 7 5 5 4 0 0 0   6 2.62 4.14 68.4 -2.93 -0.58 32.5 84 8 6 5 1 2 0 0   7 1.75 1.80 72.5 -2.34 -0.60 28.8 84 8 10 7 5 1 1 0   8 1.46 1.62 80.9 -1.68 -0.46 22.1 83 9 7 5 10 1 0 0   9 1.36 2.88 86.8 -1.95 -0.40 27.9 84 14 12 4 7 1 0 0  ADP 781 A 10 1.34 2.87 88.8 -1.93 -0.46 23.9 87 11 9 5 6 1 0 0   11 1.30 1.36 109.5 -1.79 -0.44 25.1 85 13 13 6 9 1 0 0  ADP 781 A 12 1.17 1.43 123.0 -1.14 -0.18 23.5 83 12 13 6 16 4 0 0  ADP 781 A 13 1.33 2.79 125.9 -2.30 -0.55 27.1 85 15 13 6 4 1 0 0   14 1.23 2.34 195.1 -1.05 -0.25 18.7 81 18 14 8 20 8 0 0  ADP 781 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.