PDBsum entry 2ib9 Go to PDB code:  Tunnel analysis for: 2ib9 calculated with MOLE 2.0 PDB id 2ib9 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.31 1.48 18.7 -1.47 -0.27 21.8 79 2 2 1 2 1 1 0   2 1.33 1.43 21.2 -1.13 -0.33 17.9 83 4 3 2 4 1 0 0   3 1.32 1.43 29.5 -1.22 -0.27 20.1 81 3 2 2 5 1 0 0   4 1.15 1.66 28.9 0.78 0.27 6.8 78 2 0 3 7 3 1 2  GOL 4001 A MES 5001 A 5 1.29 1.46 15.0 -1.18 -0.12 9.2 78 1 2 2 2 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.