PDBsum entry 2iam Go to PDB code:  Tunnel analysis for: 2iam calculated with MOLE 2.0 PDB id 2iam Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.32 2.42 15.5 -1.73 -0.42 30.9 88 3 2 0 3 0 0 0   2 1.66 1.82 17.0 -2.48 -0.54 28.1 77 2 2 1 0 1 0 0   3 1.64 1.86 22.8 -1.05 -0.05 16.7 79 3 2 2 5 2 0 0   4 1.63 1.82 25.4 -1.15 -0.33 15.6 82 3 3 2 6 2 0 0   5 1.11 2.36 18.6 -0.04 0.59 8.4 63 1 1 0 3 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.