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PDBsum entry 2hmf
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Pore analysis for: 2hmf calculated with  MOLE 2.0
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PDB id
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2hmf
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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11 pores,
coloured by radius |
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9 pores,
coloured by radius
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9 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.72 |
1.72 |
28.7 |
-1.47 |
-0.48 |
18.1 |
84 |
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3 |
2 |
2 |
2 |
0 |
0 |
0 |
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2 |
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1.68 |
2.05 |
30.7 |
-1.32 |
-0.50 |
16.4 |
85 |
4 |
3 |
3 |
3 |
0 |
0 |
0 |
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3 |
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4.01 |
5.24 |
36.7 |
-3.11 |
-0.79 |
31.6 |
85 |
6 |
6 |
5 |
0 |
0 |
0 |
0 |
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4 |
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5.48 |
5.73 |
42.0 |
-3.23 |
-0.71 |
36.1 |
81 |
8 |
9 |
3 |
0 |
0 |
0 |
0 |
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5 |
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4.35 |
4.51 |
42.8 |
-2.45 |
-0.76 |
25.6 |
85 |
5 |
6 |
4 |
0 |
0 |
0 |
0 |
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6 |
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2.90 |
3.03 |
50.2 |
-2.25 |
-0.48 |
20.6 |
78 |
5 |
7 |
4 |
1 |
2 |
2 |
0 |
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7 |
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1.68 |
1.66 |
51.8 |
-2.38 |
-0.56 |
29.1 |
80 |
8 |
8 |
2 |
2 |
0 |
0 |
0 |
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8 |
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3.21 |
6.01 |
62.3 |
-3.05 |
-0.65 |
30.0 |
84 |
9 |
6 |
7 |
1 |
0 |
1 |
0 |
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9 |
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1.22 |
2.03 |
148.7 |
-1.35 |
-0.14 |
16.6 |
79 |
8 |
8 |
5 |
7 |
5 |
2 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program