spacer
spacer

PDBsum entry 2hdu

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 2hdu calculated with MOLE 2.0 PDB id
2hdu
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
0 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.18 1.39 34.4 -1.59 -0.47 9.2 81 4 0 6 5 0 2 0  F12 1002 B
2 1.28 1.51 38.4 -0.40 -0.15 6.9 77 3 0 3 6 1 4 0  F12 1002 B
3 1.15 2.45 157.7 -1.46 -0.34 15.0 75 9 3 9 7 2 7 0  F12 1002 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer