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PDBsum entry 2gyc
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Tunnel analysis for: 2gyc calculated with  MOLE 2.0
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PDB id
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2gyc
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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6 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.18 |
2.96 |
20.9 |
3.37 |
0.91 |
1.1 |
84 |
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0 |
1 |
0 |
9 |
1 |
0 |
0 |
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2 |
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1.21 |
3.12 |
21.2 |
3.43 |
0.94 |
1.1 |
86 |
0 |
1 |
0 |
10 |
1 |
0 |
0 |
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3 |
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1.17 |
2.87 |
22.3 |
2.98 |
0.93 |
3.9 |
77 |
1 |
0 |
0 |
9 |
1 |
1 |
0 |
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4 |
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1.19 |
2.65 |
22.6 |
3.10 |
0.97 |
3.5 |
79 |
1 |
0 |
0 |
10 |
1 |
1 |
0 |
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5 |
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1.14 |
1.13 |
19.8 |
0.24 |
0.07 |
11.1 |
79 |
2 |
0 |
0 |
4 |
0 |
0 |
1 |
A 1493 0 A 1494 0
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6 |
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1.46 |
1.69 |
15.3 |
1.36 |
0.29 |
1.7 |
88 |
0 |
0 |
1 |
6 |
0 |
0 |
0 |
A 2176 0
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program